To check for HMPEs chill the bio slowly ... fridge at circa 2°C should be fine, but often they can form at higher temperatures.
We should have a wiki page on this but there was some doubt as to exactly what they were and I think we shied away from it. What ever they are we should really make a page as they exist and can cause big problems if they form in the car.
I posted quite a lot of experimental info on the VOD several years ago, but I think much data in HTML tables was lost when HTML was disallowed. Just looked and all my VOD book marks have been erased, but I did magage to find the thread ...
http://www.vegetableoildiesel.co.uk/mybbforum/showthread.php?tid=16876&highlight=controlling+the+little+buggers (now I've found it I'll see if I can rescue some of the data for the wiki).
Extract from the thread ... here's a photo of what I swabbed out of the Disco tank one winter.

Julian ... are you saying HMPEs are mono and di glycerides? I'd never thought of them as that, but I guess it could be tested by chilling a sample of partly converted bio and comparing it with a fully converted sample from the same batch.
I've had collection of HMPEs in a jam jar from last winter which have survived all summer without melting. I might try a 3/27 test which was suggested some time ago.
Anyhow, Simon, if you just want ti do one reaction why do the first half of a two stage? Why not just do a single stage with all the chemicals. You should get a far better conversion for the same effort.