Someone off infopop once told me not to have the eductor pointing down, they were wrong. If the pump is man enough, the processor contents will 'turn round' in a vertical direction.
Using weak pumps in the past with no eductor, I got used to seeing the methoxide layer sitting on top of the oil for a while until it got mixed in. Nowadays the methoxide goes in within 10 seconds through my 1" venturi and the actual mixing of methoxide/oil is instant, turning the whole mix opaque for about 3 mins until the reaction is complete enough for the excess methanol to be miscible.
See, us plastic boys can see this whereas youse metal boys can't.
Getting back to the square tank thing, if the mixing is adequate I can't see it making any difference.